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  • Top cofit genes for PS417_04340 from Pseudomonas simiae WCS417

    ribosome hibernation promoting factor HPF
    SEED: Ribosome hibernation protein YhbH
    KEGG: putative sigma-54 modulation protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00305 cytochrome oxidase subunit I 0.80 0.47
    2 PS417_00335 cytochrome B561 0.80 0.45
    3 PS417_00300 cytochrome B559 subunit alpha 0.81 0.45
    4 PS417_22780 XRE family transcriptional regulator no 0.45
    5 PS417_25835 hypothetical protein 0.82 0.45
    6 PS417_02975 3-dehydroquinate dehydratase no 0.43
    7 PS417_26985 phosphoenolpyruvate-protein phosphotransferase 0.61 0.43
    8 PS417_27535 chemotaxis protein CheY 0.52 0.43
    9 PS417_26235 (Fe-S)-binding protein no 0.42
    10 PS417_14920 CoA-transferase 0.31 0.42
    11 PS417_25840 SpoVR family protein 0.83 0.41
    12 PS417_16005 ATPase 0.85 0.41
    13 PS417_12120 IclR family transcriptional regulator no 0.41
    14 PS417_16990 acyl-CoA dehydrogenase 0.45 0.40
    15 PS417_22775 histidine kinase 0.36 0.40
    16 PS417_14835 amidase 0.35 0.39
    17 PS417_22125 porin 0.57 0.39
    18 PS417_24835 hypothetical protein 0.76 0.39
    19 PS417_16510 Clp protease ClpX 0.88 0.39
    20 PS417_26250 peptidase M19 no 0.38

    Or look for negative cofitness