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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF850 from
Variovorax sp. SCN45
Two-component transcriptional response regulator, LuxR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5831
Ketosteroid isomerase-related protein
no
0.55
2
GFF3204
no description
no
0.53
3
GFF6285
Probable signal peptide protein
no
0.52
4
GFF1636
Non-ribosomal peptide synthetase modules, pyoverdine @ Siderophore biosynthesis non-ribosomal peptide synthetase modules
no
0.52
5
GFF6383
FIG00440100: hypothetical protein
no
0.51
6
GFF5917
T6SS component TssB (ImpB/VipA)
no
0.51
7
GFF1792
Transcriptional regulator, IclR family
no
0.50
8
GFF1190
Glycine oxidase ThiO (EC 1.4.3.19)
no
0.50
9
GFF5590
no description
no
0.50
10
GFF4694
no description
no
0.49
11
GFF2097
Alpha-methylacyl-CoA racemase (EC 5.1.99.4)
no
0.48
12
GFF2189
Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
no
0.48
13
GFF5203
hypothetical protein
no
0.48
14
GFF1195
iron-sulphur protein
no
0.48
15
GFF156
Glycosyl transferase, group 2 family
no
0.48
16
GFF5742
Flagellar motor switch protein FliN
no
0.48
17
GFF1741
UPF0324 inner membrane protein YeiH
no
0.47
18
GFF2543
Uncharacterized membrane protein Bcep18194_A6058
no
0.47
19
GFF2283
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.47
20
GFF5621
ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.47
Or look for
negative cofitness