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  • Top cofit genes for PS417_04295 from Pseudomonas simiae WCS417

    peptidase PmbA
    SEED: TldE protein, part of TldE/TldD proteolytic complex
    KEGG: PmbA protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04285 protease TldD 0.97 0.64
    2 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 0.29 0.53
    3 PS417_19675 chemotaxis protein CheY 0.78 0.52
    4 PS417_19695 flagellar biosynthesis sigma factor 0.80 0.52
    5 PS417_20100 hypothetical protein no 0.51
    6 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA 0.57 0.51
    7 PS417_19880 flagellar basal body L-ring protein 0.78 0.51
    8 PS417_19665 flagellar motor protein MotD no 0.50
    9 PS417_21565 flagellar basal body rod protein FlgC 0.73 0.50
    10 PS417_19725 flagellar biosynthesis protein FlhB 0.82 0.50
    11 PS417_21555 flagellar hook protein FlgE 0.84 0.50
    12 PS417_19710 flagellar biosynthesis protein FlhA 0.86 0.50
    13 PS417_19745 flagellar assembly protein FliO no 0.50
    14 PS417_19690 histidine kinase 0.71 0.50
    15 PS417_19860 flagellar hook protein FlgL 0.81 0.49
    16 PS417_19765 flagellar hook-length control protein 0.57 0.49
    17 PS417_19740 flagellar biosynthesis protein flip 0.80 0.49
    18 PS417_00245 oligopeptidase A 0.91 0.49
    19 PS417_19835 flagellar biosynthesis protein FliS 0.82 0.49
    20 PS417_19885 flagellar basal body rod protein FlgG 0.82 0.49

    Or look for negative cofitness