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  • Top cofit genes for PS417_04285 from Pseudomonas simiae WCS417

    protease TldD
    SEED: TldD protein, part of TldE/TldD proteolytic complex
    KEGG: TldD protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04295 peptidase PmbA 0.97 0.64
    2 PS417_19675 chemotaxis protein CheY 0.82 0.52
    3 PS417_19685 protein phosphatase 0.87 0.52
    4 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.51
    5 PS417_19660 cobalamin biosynthesis protein CobQ 0.57 0.51
    6 PS417_19690 histidine kinase 0.80 0.50
    7 PS417_00245 oligopeptidase A 0.94 0.50
    8 PS417_19615 chemotaxis protein CheW no 0.49
    9 PS417_18540 colicin V production CvpA 0.65 0.49
    10 PS417_19710 flagellar biosynthesis protein FlhA 0.89 0.49
    11 PS417_19665 flagellar motor protein MotD no 0.48
    12 PS417_19880 flagellar basal body L-ring protein 0.84 0.48
    13 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA no 0.48
    14 PS417_03230 TetR family transcriptional regulator 0.60 0.48
    15 PS417_19745 flagellar assembly protein FliO no 0.48
    16 PS417_19795 flagellar assembly protein FliH 0.33 0.48
    17 PS417_19725 flagellar biosynthesis protein FlhB 0.87 0.48
    18 PS417_19860 flagellar hook protein FlgL 0.32 0.47
    19 PS417_19695 flagellar biosynthesis sigma factor 0.82 0.47
    20 PS417_19655 chemotaxis protein CheW no 0.47

    Or look for negative cofitness