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  • Top cofit genes for GFF839 from Variovorax sp. SCN45

    Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)
    SEED: Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4871 FIG00457034: hypothetical protein no 0.68
    2 GFF3165 Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2) no 0.66
    3 GFF2207 Flp pilus assembly protein TadB no 0.64
    4 GFF5440 RNA polymerase ECF-type sigma factor no 0.63
    5 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.62
    6 GFF2480 Urease accessory protein UreG no 0.60
    7 GFF1523 KEGG: transmembrane sensor no 0.60
    8 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) no 0.59
    9 GFF4292 no description no 0.59
    10 GFF2248 Transcriptional regulatory protein RtcR no 0.59
    11 GFF6834 no description no 0.58
    12 GFF7049 hypothetical protein no 0.58
    13 GFF2482 Urease accessory protein UreE no 0.57
    14 GFF4120 no description no 0.56
    15 GFF4108 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.56
    16 GFF2231 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) no 0.56
    17 GFF3193 no description no 0.56
    18 GFF96 RNA polymerase ECF-type sigma factor no 0.56
    19 GFF2717 Epimerase KguE no 0.56
    20 GFF7242 hypothetical protein no 0.55

    Or look for negative cofitness