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  • Top cofit genes for PS417_04230 from Pseudomonas simiae WCS417

    lipoprotein
    SEED: Rare lipoprotein A
    KEGG: rare lipoprotein A

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27875 histidine kinase no 0.25
    2 PS417_26660 protein PilI 0.27 0.25
    3 PS417_16165 ABC transporter substrate-binding protein no 0.24
    4 PS417_15255 serine/threonine protein kinase 0.41 0.24
    5 PS417_26650 histidine kinase 0.27 0.23
    6 PS417_11875 Inositol 2-dehydrogenase (EC 1.1.1.18) (from data) no 0.23
    7 PS417_26655 chemotaxis protein no 0.22
    8 PS417_01415 glycosyl transferase family 1 no 0.22
    9 PS417_24165 hypothetical protein no 0.21
    10 PS417_01395 biofilm formation protein PelB no 0.21
    11 PS417_01420 histidine kinase no 0.21
    12 PS417_01410 transporter 0.24 0.20
    13 PS417_02985 diguanylate cyclase no 0.20
    14 PS417_19960 membrane protein no 0.20
    15 PS417_01390 PbsX family transcriptional regulator no 0.19
    16 PS417_05080 LysR family transcriptional regulator no 0.19
    17 PS417_15260 protein phosphatase no 0.19
    18 PS417_26055 cyclic nucleotide-binding protein no 0.19
    19 PS417_05940 spermidine/putrescine ABC transporter substrate-binding protein no 0.19
    20 PS417_20830 transporter no 0.19

    Or look for negative cofitness