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  • Top cofit genes for GFF833 from Variovorax sp. SCN45

    Proteins containing SET domain
    SEED: Proteins containing SET domain

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3027 T6SS component TssK (ImpJ/VasE) no 0.60
    2 GFF6489 no description no 0.54
    3 GFF3060 Dihydrodipicolinate synthase family no 0.54
    4 GFF5101 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.25 0.53
    5 GFF6248 Site-specific recombinase no 0.51
    6 GFF3771 no description no 0.51
    7 GFF472 hypothetical protein no 0.50
    8 GFF5848 Flagellar motor protein no 0.50
    9 GFF7160 hypothetical protein no 0.49
    10 GFF4877 no description no 0.48
    11 GFF5097 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) no 0.48
    12 GFF37 Similar to Agmatine deiminase no 0.48
    13 GFF6567 hypothetical protein no 0.46
    14 GFF4018 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.46
    15 GFF1305 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.45
    16 GFF4870 Glycosidases no 0.45
    17 GFF4539 no description no 0.44
    18 GFF1171 Transcriptional regulator, AraC family no 0.44
    19 GFF617 no description no 0.44
    20 GFF5199 Galactofuranose ABC transporter, permease protein 2 no 0.44

    Or look for negative cofitness