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  • Top cofit genes for PS417_04225 from Pseudomonas simiae WCS417

    conjugal transfer protein TraR
    KEGG: inner membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17170 carbon-nitrogen hydrolase 0.75 0.33
    2 PS417_24715 lytic transglycosylase 0.61 0.30
    3 PS417_22815 permease 0.52 0.27
    4 PS417_25650 anhydro-N-acetylmuramic acid kinase 0.53 0.26
    5 PS417_27285 Xaa-Pro aminopeptidase 0.60 0.25
    6 PS417_05705 pyocin R2, holin no 0.24
    7 PS417_25790 aminoglycoside phosphotransferase 0.54 0.24
    8 PS417_16515 Clp protease ClpS 0.20 0.24
    9 PS417_24835 hypothetical protein 0.80 0.22
    10 PS417_08230 lipopolysaccharide biosynthesis protein RfbH no 0.21
    11 PS417_17785 4-amino-4-deoxy-L-arabinose transferase 0.11 0.21
    12 PS417_21380 GntR family transcriptional regulator no 0.20
    13 PS417_15845 membrane protein 0.24 0.19
    14 PS417_01730 histidine ABC transporter substrate-binding protein no 0.19
    15 PS417_06135 glycerol-3-phosphate acyltransferase no 0.19
    16 PS417_18825 TetR family transcriptional regulator no 0.19
    17 PS417_13820 UDP-glucose 6-dehydrogenase no 0.18
    18 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase no 0.18
    19 PS417_00310 cysteine synthase 0.79 0.18
    20 PS417_22325 amino acid APC transporter 0.34 0.18

    Or look for negative cofitness