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  • Top cofit genes for PS417_04210 from Pseudomonas simiae WCS417

    Galactarate dehydratase (EC 4.2.1.42) (from data)
    Original annotation: galactarate dehydrogenase
    SEED: D-galactarate dehydratase (EC 4.2.1.42)
    KEGG: galactarate dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17360 D-galacturonate dehydrogenase (EC 1.1.1.203) (from data) 0.55 0.27
    2 PS417_10535 hypothetical protein no 0.21
    3 PS417_04200 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) (from data) 0.63 0.20
    4 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.91 0.19
    5 PS417_04140 aldo/keto reductase no 0.18
    6 PS417_14775 major facilitator transporter 0.98 0.17
    7 PS417_03155 transcriptional regulator 0.39 0.16
    8 PS417_22615 hypothetical protein no 0.16
    9 PS417_09735 hypothetical protein no 0.16
    10 PS417_14240 isochorismatase no 0.15
    11 PS417_00025 transcriptional regulator no 0.15
    12 PS417_07150 permase no 0.15
    13 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) no 0.15
    14 PS417_07230 citrate-proton symporter 0.61 0.15
    15 PS417_00975 hypothetical protein no 0.15
    16 PS417_24185 hypothetical protein no 0.14
    17 PS417_27795 orotate phosphoribosyltransferase no 0.14
    18 PS417_24260 glutamate dehydrogenase 0.48 0.14
    19 PS417_00280 radical SAM protein 0.48 0.14
    20 PS417_23865 XRE family transcriptional regulator 0.32 0.14

    Or look for negative cofitness