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  • Top cofit genes for GFF828 from Variovorax sp. SCN45

    CobW GTPase involved in cobalt insertion for B12 biosynthesis
    SEED: CobW GTPase involved in cobalt insertion for B12 biosynthesis
    KEGG: cobalamin biosynthesis protein CobW

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF426 Cobyric acid synthase (EC 6.3.5.10) 0.94 0.63
    2 GFF2091 Cobalt/zinc/cadmium resistance protein CzcD 0.17 0.61
    3 GFF2425 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) no 0.59
    4 GFF1168 Arginyl-tRNA--protein transferase (EC 2.3.2.8) no 0.58
    5 GFF829 Aerobic cobaltochelatase CobN subunit (EC 6.6.1.2) 0.94 0.58
    6 GFF536 no description no 0.57
    7 GFF439 Adenosylcobinamide-phosphate synthase (EC 6.3.1.10) no 0.57
    8 GFF6770 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 0.38 0.56
    9 GFF440 CobN-like chelatase BtuS for metalloporphyrine salvage no 0.56
    10 GFF3943 Poly(A) polymerase (EC 2.7.7.19) no 0.56
    11 GFF1556 Tricarboxylate transport protein TctC no 0.56
    12 GFF1817 5-hydroxyisourate hydrolase (EC 3.5.2.17) no 0.55
    13 GFF401 PhbF no 0.55
    14 GFF6429 Pyruvate:Oxaloacetate transcarboxylase domain protein no 0.55
    15 GFF2500 Mutator MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) no 0.55
    16 GFF6701 Regulatory protein, RpfE type no 0.55
    17 GFF2745 FIG074102: hypothetical protein no 0.54
    18 GFF365 Acyl-CoA dehydrogenase 0.30 0.54
    19 GFF754 FIG00975093: hypothetical protein no 0.54
    20 GFF2607 hypothetical protein no 0.53

    Or look for negative cofitness