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  • Top cofit genes for GFF827 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    HflK protein
    SEED: HflK protein
    KEGG: membrane protease subunit HflK

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF828 HflC protein 0.99 0.97
    2 GFF3417 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.94 0.93
    3 GFF826 GTP-binding protein HflX 0.88 0.89
    4 GFF4158 tmRNA-binding protein SmpB 0.78 0.78
    5 GFF4352 Cell division trigger factor (EC 5.2.1.8) 0.79 0.66
    6 GFF81 Ferric hydroxamate outer membrane receptor FhuA no 0.65
    7 GFF825 RNA-binding protein Hfq 0.47 0.63
    8 GFF3706 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) no 0.58
    9 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.68 0.56
    10 GFF1109 Putative LysR family transcriptional regulator no 0.54
    11 GFF136 FIG002842: hypothetical protein no 0.53
    12 GFF4615 FIG137478: Hypothetical protein YbgI no 0.53
    13 GFF2428 Peptidase B (EC 3.4.11.23) 0.32 0.51
    14 GFF591 Transcriptional regulatory protein RtcR no 0.51
    15 GFF3138 Two-component system response regulator QseB 0.63 0.50
    16 GFF2772 FIG002082: Protein SirB2 no 0.50
    17 GFF2590 D-alanyl-D-alanine dipeptidase (EC 3.4.13.22) no 0.50
    18 GFF3052 Transcriptional regulator, IclR family no 0.50
    19 GFF1690 RNA polymerase sigma factor for flagellar operon 0.77 0.49
    20 GFF1530 Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56) no 0.48

    Or look for negative cofitness