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  • Top cofit genes for GFF822 from Variovorax sp. SCN45

    Na+/H+-dicarboxylate symporter
    SEED: Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate
    KEGG: aerobic C4-dicarboxylate transport protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5132 no description no 0.56
    2 GFF7378 protein of unknown function DUF1311 no 0.54
    3 GFF2914 Glutamine ABC transporter, ATP-binding protein GlnQ no 0.53
    4 GFF5855 T1SS secreted agglutinin RTX no 0.51
    5 GFF193 Two-component sensor PilS no 0.48
    6 GFF4296 hypothetical protein no 0.47
    7 GFF835 Two-component system sensor histidine kinase no 0.47
    8 GFF6811 hypothetical protein no 0.47
    9 GFF1039 Far-related protein no 0.46
    10 GFF2738 hypothetical protein no 0.44
    11 GFF4554 Protease HtpX 0.41 0.44
    12 GFF3648 putative c'cytochrome no 0.44
    13 GFF2290 Chromosome partitioning protein ParA no 0.44
    14 GFF1049 low-specificity D-threonine aldolase no 0.43
    15 GFF3554 FIG01121542: hypothetical protein no 0.43
    16 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) 0.34 0.43
    17 GFF2386 Response regulator BaeR no 0.43
    18 GFF4817 Hydroxymethylpyrimidine ABC transporter, ATPase component no 0.42
    19 GFF6543 Transcriptional regulator, LysR family no 0.42
    20 GFF517 no description no 0.42

    Or look for negative cofitness