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  • Top cofit genes for GFF818 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4439 Probable transmembrane protein no 0.63
    2 GFF3743 Twitching motility protein PilT no 0.60
    3 GFF168 MCP methyltransferase, CheR-type no 0.60
    4 GFF2517 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase no 0.59
    5 GFF808 Polyhydroxyalkanoic acid synthase no 0.58
    6 GFF5666 Prevent host death protein, Phd antitoxin no 0.57
    7 GFF4576 BUG/TctC family periplasmic protein no 0.57
    8 GFF169 Protein-glutamate methylesterase (EC 3.1.1.61) no 0.56
    9 GFF6723 Cysteine desulfurase (EC 2.8.1.7) no 0.56
    10 GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) 0.33 0.55
    11 GFF5246 Threonine dehydratase biosynthetic (EC 4.3.1.19) no 0.54
    12 GFF2847 histone-like nucleoid-structuring protein H-NS no 0.54
    13 GFF1151 Nitrogen regulatory protein P-II no 0.54
    14 GFF4773 Broad-specificity amino acid ABC transporter, ATP-binding protein 1 no 0.54
    15 GFF3017 T6SS AAA+ chaperone ClpV (TssH) no 0.53
    16 GFF3600 Pantothenate kinase type III, CoaX-like (EC 2.7.1.33) no 0.53
    17 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) no 0.53
    18 GFF273 Transcriptional regulator, Xre family no 0.52
    19 GFF715 hypothetical protein no 0.52
    20 GFF2543 Uncharacterized membrane protein Bcep18194_A6058 no 0.52

    Or look for negative cofitness