Top cofit genes for GFF817 from Hydrogenophaga sp. GW460-11-11-14-LB1

Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)
SEED: Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF3339		RNA polymerase sigma factor RpoE	0.38	0.82
2	GFF1204		Regulatory protein of benzoate catabolism	no	0.82
3	GFF4908		Membrane-associated zinc metalloprotease	0.46	0.81
4	GFF803		PQQ-dependent oxidoreductase, gdhB family	no	0.78
5	GFF2715		rRNA small subunit methyltransferase I	0.89	0.78
6	GFF721		Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2)	no	0.76
7	GFF726		Enoyl-CoA hydratase (EC 4.2.1.17)	no	0.76
8	GFF1021		Mobile element protein	no	0.75
9	GFF2575		Branched-chain amino acid transport protein AzlC	no	0.74
10	GFF1011		Transcriptional regulator, IclR family	no	0.74
11	GFF1239		FIG00933538: hypothetical protein	no	0.73
12	GFF5493		Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)	no	0.73
13	GFF401		Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A	no	0.72
14	GFF2610		Patatin	no	0.71
15	GFF2931		Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)	no	0.70
16	GFF2780		Pyruvate kinase (EC 2.7.1.40)	0.53	0.70
17	GFF1683		Protein involved in catabolism of external DNA	0.48	0.70
18	GFF4926		Alpha/beta hydrolase fold	0.29	0.70
19	GFF4644		Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)	no	0.70
20	GFF2583		Ferric iron ABC transporter, permease protein	no	0.69

Or look for negative cofitness