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  • Top cofit genes for PS417_04130 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06365 RNA polymerase sigma factor no 0.34
    2 PS417_16160 ABC transporter substrate-binding protein no 0.32
    3 PS417_21040 sulfurylase 0.63 0.31
    4 PS417_28265 pyridoxamine kinase no 0.30
    5 PS417_16370 chemotaxis protein CheY 0.30 0.30
    6 PS417_20955 secretion protein no 0.29
    7 PS417_10720 chemotaxis protein CheY 0.28 0.29
    8 PS417_15565 transketolase no 0.29
    9 PS417_16070 TonB-dependent receptor no 0.28
    10 PS417_19145 membrane protein no 0.28
    11 PS417_03070 LuxR family transcriptional regulator no 0.28
    12 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.28
    13 PS417_13425 cupin no 0.28
    14 PS417_24605 thiamine-phosphate pyrophosphorylase no 0.27
    15 PS417_12610 RNA polymerase sigma factor no 0.27
    16 PS417_04995 glutathione S-transferase no 0.27
    17 PS417_17515 GfdT protein 0.16 0.27
    18 PS417_21045 cysteine synthase no 0.27
    19 PS417_12550 chemotaxis protein no 0.26
    20 PS417_22230 class I peptide chain release factor no 0.26

    Or look for negative cofitness