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  • Top cofit genes for GFF807 from Variovorax sp. SCN45

    FIG00003370: Multicopper polyphenol oxidase
    SEED: COG1496: Uncharacterized conserved protein
    KEGG: conserved hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1648 Ligand-binding SRPBCC domain protein family no 0.58
    2 GFF1885 Gluconate transporter family protein 0.22 0.52
    3 GFF6848 Biopolymer transport protein ExbD/TolR no 0.45
    4 GFF1843 Xanthine/uracil/thiamine/ascorbate permease family protein 0.37 0.43
    5 GFF418 Endonuclease III (EC 4.2.99.18) 0.47 0.41
    6 GFF5764 hypothetical protein no 0.41
    7 GFF2107 no description no 0.41
    8 GFF5122 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.41
    9 GFF2702 FAD-dependent oxidoreductase no 0.40
    10 GFF4259 Transcriptional regulator, DeoR family no 0.40
    11 GFF689 protein of unknown function DUF521 no 0.40
    12 GFF4188 Signal peptidase I (EC 3.4.21.89) no 0.40
    13 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.40
    14 GFF6168 Na(+) H(+) antiporter subunit G 0.42 0.40
    15 GFF3473 no description no 0.39
    16 GFF1097 Phosphate regulon transcriptional regulatory protein PhoB (SphR) no 0.39
    17 GFF4413 CopG domain-containing protein no 0.39
    18 GFF317 Acyl carrier protein 0.20 0.39
    19 GFF5004 N-acyl-L-amino acid amidohydrolase (EC 3.5.1.14) no 0.39
    20 GFF5951 no description no 0.39

    Or look for negative cofitness