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  • Top cofit genes for PS417_04075 from Pseudomonas simiae WCS417

    peptide ABC transporter substrate-binding protein
    SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
    KEGG: dipeptide transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04070 porin 0.91 0.79
    2 PS417_04060 dipeptide ABC transporter, permease component (from data) 0.92 0.65
    3 PS417_04055 peptide transporter 0.91 0.59
    4 PS417_04065 peptide ABC transporter substrate-binding protein 0.53 0.54
    5 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) 0.87 0.46
    6 PS417_26020 transcriptional initiation protein Tat no 0.42
    7 PS417_17640 macrolide ABC transporter ATP-binding protein no 0.40
    8 PS417_04080 peptide ABC transporter substrate-binding protein 0.88 0.40
    9 PS417_04860 ATPase no 0.38
    10 PS417_00580 acyl-CoA dehydrogenase no 0.38
    11 PS417_04050 peptide ABC transporter ATP-binding protein 0.85 0.37
    12 PS417_04270 ribonuclease G 0.62 0.36
    13 PS417_16990 acyl-CoA dehydrogenase no 0.36
    14 PS417_14005 4-hydroxyphenylpyruvate dioxygenase no 0.35
    15 PS417_22740 imelysin no 0.34
    16 PS417_01710 histidine utilization repressor 0.62 0.34
    17 PS417_17635 hemolysin secretion protein D no 0.33
    18 PS417_19555 RNA polymerase sigma70 no 0.33
    19 PS417_12205 hypothetical protein 0.65 0.33
    20 PS417_06605 leucine/isoleucine/valine transporter permease subunit 0.86 0.32

    Or look for negative cofitness