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  • Top cofit genes for PS417_04070 from Pseudomonas simiae WCS417

    porin
    SEED: Outer membrane porin, OprD family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04075 peptide ABC transporter substrate-binding protein 0.91 0.79
    2 PS417_04060 dipeptide ABC transporter, permease component (from data) 0.58 0.72
    3 PS417_04055 peptide transporter 0.56 0.64
    4 PS417_04065 peptide ABC transporter substrate-binding protein 0.93 0.60
    5 PS417_04050 peptide ABC transporter ATP-binding protein 0.48 0.49
    6 PS417_16990 acyl-CoA dehydrogenase 0.59 0.49
    7 PS417_04080 peptide ABC transporter substrate-binding protein 0.89 0.48
    8 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) no 0.46
    9 PS417_12205 hypothetical protein 0.70 0.42
    10 PS417_22500 porin no 0.41
    11 PS417_04860 ATPase no 0.39
    12 PS417_04270 ribonuclease G no 0.38
    13 PS417_00580 acyl-CoA dehydrogenase 0.31 0.37
    14 PS417_12195 ABC transporter permease 0.65 0.37
    15 PS417_23890 ATPase 0.60 0.37
    16 PS417_01710 histidine utilization repressor 0.44 0.37
    17 PS417_26020 transcriptional initiation protein Tat no 0.35
    18 PS417_25790 aminoglycoside phosphotransferase no 0.35
    19 PS417_21210 amidotransferase no 0.34
    20 PS417_06605 leucine/isoleucine/valine transporter permease subunit no 0.34

    Or look for negative cofitness