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Cofit
Protein
Homologs
Top cofit genes for GFF801 from
Variovorax sp. SCN45
Murein hydrolase activator NlpD
SEED: Lipoprotein NlpD
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF476
InterPro IPR005134 COGs COG2862
no
0.60
2
GFF4365
3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
no
0.60
3
GFF812
Putative reductase
no
0.55
4
GFF358
hypothetical protein
no
0.54
5
GFF5853
Type I secretion system ATPase, LssB family LapB
no
0.54
6
GFF1074
no description
no
0.54
7
GFF4804
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
no
0.53
8
GFF3414
Fumarylacetoacetase (EC 3.7.1.2)
no
0.52
9
GFF959
Phage holin
no
0.52
10
GFF6808
Peroxiredoxin OsmC (EC 1.11.1.15)
no
0.51
11
GFF895
Putative transcriptional regulatory protein
no
0.51
12
GFF5218
ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.51
13
GFF6006
BUG/TctC family periplasmic protein
no
0.50
14
GFF4563
Ferredoxin, 2Fe-2S
no
0.50
15
GFF5396
ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
no
0.50
16
GFF4881
HYPOTHETICAL/UNKNOWN PROTEIN
no
0.50
17
GFF3301
Lignostilbene-alpha,beta-dioxygenase and related enzymes
no
0.50
18
GFF3432
L-carnitine dehydratase/bile acid-inducible protein F
no
0.50
19
GFF5620
ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.49
20
GFF3155
Gluconolactonase (EC 3.1.1.17)
no
0.48
Or look for
negative cofitness