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  • Top cofit genes for PS417_04065 from Pseudomonas simiae WCS417

    peptide ABC transporter substrate-binding protein
    SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04070 porin 0.93 0.60
    2 PS417_04075 peptide ABC transporter substrate-binding protein 0.53 0.54
    3 PS417_04060 dipeptide ABC transporter, permease component (from data) 0.40 0.50
    4 PS417_04055 peptide transporter 0.43 0.43
    5 PS417_04080 peptide ABC transporter substrate-binding protein 0.35 0.43
    6 PS417_04270 ribonuclease G no 0.38
    7 PS417_00580 acyl-CoA dehydrogenase no 0.36
    8 PS417_16990 acyl-CoA dehydrogenase 0.20 0.35
    9 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) no 0.32
    10 PS417_22740 imelysin no 0.32
    11 PS417_14005 4-hydroxyphenylpyruvate dioxygenase no 0.31
    12 PS417_12205 hypothetical protein 0.32 0.31
    13 PS417_25835 hypothetical protein 0.34 0.31
    14 PS417_04050 peptide ABC transporter ATP-binding protein 0.34 0.30
    15 PS417_17545 2-oxoisovalerate dehydrogenase no 0.30
    16 PS417_12200 microcin ABC transporter permease 0.32 0.29
    17 PS417_16005 ATPase no 0.29
    18 PS417_19335 isochorismatase no 0.28
    19 PS417_22735 thiol oxidoreductase no 0.28
    20 PS417_22745 hypothetical protein no 0.27

    Or look for negative cofitness