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  • Top cofit genes for GFF8 from Variovorax sp. SCN45

    RND efflux system, outer membrane lipoprotein, NodT family
    SEED: RND efflux system, outer membrane lipoprotein, NodT family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4539 no description no 0.55
    2 GFF5907 Biotin synthase-related enzyme no 0.54
    3 GFF3702 Beta-propeller domains of methanol dehydrogenase type no 0.53
    4 GFF6854 RNA polymerase ECF-type sigma factor no 0.49
    5 GFF4657 hypothetical protein 0.56 0.48
    6 GFF2099 Acyl-CoA dehydrogenase no 0.48
    7 GFF6202 Unknown substrate:proton symporter no 0.46
    8 GFF6555 no description no 0.46
    9 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.46
    10 GFF3462 Urea ABC transporter, permease protein UrtC no 0.46
    11 GFF1133 FIG00431745: hypothetical protein no 0.46
    12 GFF1312 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.46
    13 GFF3039 Two-component transcriptional response regulator, LuxR family no 0.45
    14 GFF6521 Auxin efflux carrier family protein no 0.45
    15 GFF4177 Epoxyqueuosine reductase (EC 1.17.99.6) QueH no 0.45
    16 GFF5086 Glycine betaine transporter OpuD no 0.45
    17 GFF5091 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) no 0.45
    18 GFF6264 Ribose 1,5-bisphosphate phosphokinase PhnN (EC 2.7.4.23) no 0.45
    19 GFF3570 Organic hydroperoxide resistance transcriptional regulator no 0.45
    20 GFF5024 hypothetical protein no 0.45

    Or look for negative cofitness