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  • Top cofit genes for PS417_04050 from Pseudomonas simiae WCS417

    peptide ABC transporter ATP-binding protein
    SEED: Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2)
    KEGG: dipeptide transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04060 dipeptide ABC transporter, permease component (from data) 0.98 0.52
    2 PS417_04070 porin 0.48 0.49
    3 PS417_04055 peptide transporter 0.98 0.43
    4 PS417_01795 glucosyltransferase MdoH 0.84 0.39
    5 PS417_16990 acyl-CoA dehydrogenase no 0.37
    6 PS417_04075 peptide ABC transporter substrate-binding protein 0.85 0.37
    7 PS417_16005 ATPase 0.24 0.36
    8 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase 0.50 0.36
    9 PS417_04080 peptide ABC transporter substrate-binding protein 0.86 0.34
    10 PS417_24710 lipoprotein 0.40 0.34
    11 PS417_01790 glucan biosynthesis protein G 0.51 0.33
    12 PS417_22500 porin no 0.33
    13 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.75 0.33
    14 PS417_12205 hypothetical protein 0.62 0.32
    15 PS417_04065 peptide ABC transporter substrate-binding protein 0.34 0.30
    16 PS417_12195 ABC transporter permease 0.25 0.30
    17 PS417_04270 ribonuclease G 0.65 0.30
    18 PS417_27025 DNA-binding protein no 0.30
    19 PS417_22780 XRE family transcriptional regulator no 0.30
    20 PS417_12805 glycogen branching protein 0.45 0.30

    Or look for negative cofitness