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  • Top cofit genes for GFF794 from Variovorax sp. SCN45

    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1219 SAM-dependent methyltransferase no 0.56
    2 GFF6153 Transcriptional activator of acetoin/glycerol metabolism no 0.55
    3 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.53
    4 GFF3130 hypothetical protein no 0.53
    5 GFF334 Transcriptional regulator, AraC family no 0.52
    6 GFF958 ElaB protein no 0.52
    7 GFF7139 MATE efflux family protein no 0.51
    8 GFF5441 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein no 0.50
    9 GFF4558 RNA polymerase ECF-type sigma factor no 0.49
    10 GFF4113 hypothetical protein no 0.49
    11 GFF163 no description no 0.49
    12 GFF4819 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.48
    13 GFF6774 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.48
    14 GFF1358 Transcriptional regulator, LysR family no 0.48
    15 GFF6094 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) no 0.47
    16 GFF4018 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.46
    17 GFF7053 Transcriptional regulator, LysR family no 0.46
    18 GFF6503 no description no 0.46
    19 GFF1115 Putative transmembrane protein no 0.45
    20 GFF4403 Mobile element protein no 0.45

    Or look for negative cofitness