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Cofit
Protein
Homologs
Top cofit genes for GFF794 from
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Phage holin
SEED: Phage holin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3601
Type III secretion protein SsaK
no
0.55
2
GFF2196
Transaldolase (EC 2.2.1.2)
no
0.55
3
GFF3789
Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17)
no
0.54
4
GFF852
L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) (L-ascorbate utilization protein F)
no
0.53
5
GFF1876
Chemotaxis protein CheV (EC 2.7.3.-)
no
0.53
6
GFF1834
Putative dehydratase protein STM2273
no
0.52
7
GFF4042
SAM-dependent methyltransferase YafE (UbiE paralog)
no
0.52
8
GFF791
Phage antitermination protein Q
no
0.52
9
GFF2984
Uncharacterized lipoprotein YgeR precursor
no
0.50
10
GFF2928
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.50
11
GFF4097
Peptide transport periplasmic protein sapA (TC 3.A.1.5.5)
no
0.50
12
GFF1177
IncF plasmid conjugative transfer pilus assembly protein TraF
no
0.50
13
GFF1925
Diaminopimelate decarboxylase (EC 4.1.1.20)
no
0.49
14
GFF371
DNA repair protein RadC
no
0.49
15
GFF4349
Hypothetical lipoprotein YajG precursor
no
0.49
16
GFF2966
Transcriptional regulator NanR
no
0.48
17
GFF1233
Transposase
no
0.48
18
GFF1551
Similar to pipB
no
0.48
19
GFF2914
putative cytoplasmic protein
no
0.48
20
GFF3603
Secretion system apparatus protein SsaM
no
0.48
Or look for
negative cofitness