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  • Top cofit genes for PS417_04025 from Pseudomonas simiae WCS417

    glycine/betaine ABC transporter permease
    SEED: L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)
    KEGG: osmoprotectant transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04010 glycine/betaine ABC transporter ATP-binding protein 0.92 0.48
    2 PS417_04020 glycine/betaine ABC transporter substrate-binding protein 0.92 0.47
    3 PS417_04015 choline ABC transporter permease 0.91 0.37
    4 PS417_26345 choline dehydrogenase 0.35 0.25
    5 PS417_24335 50S rRNA methyltransferase no 0.24
    6 PS417_03155 transcriptional regulator no 0.24
    7 PS417_14785 glycine/betaine ABC transporter 0.72 0.23
    8 PS417_08940 thioesterase no 0.22
    9 PS417_19230 asparagine synthase 0.81 0.22
    10 PS417_20930 50S rRNA methyltransferase no 0.21
    11 PS417_24500 DEAD/DEAH box helicase no 0.21
    12 PS417_03685 FAD-dependent oxidoreductase no 0.21
    13 PS417_14425 alkylhydroperoxidase 0.63 0.21
    14 PS417_27050 ABC transporter substrate-binding protein no 0.20
    15 PS417_10150 tail protein no 0.20
    16 PS417_00525 hypothetical protein 0.65 0.19
    17 PS417_02885 hypothetical protein no 0.19
    18 PS417_04680 porin no 0.19
    19 PS417_14430 AraC family transcriptional regulator no 0.19
    20 PS417_20155 23S rRNA methyltransferase 0.23 0.19

    Or look for negative cofitness