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  • Top cofit genes for PS417_04015 from Pseudomonas simiae WCS417

    choline ABC transporter permease
    SEED: L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)
    KEGG: osmoprotectant transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04020 glycine/betaine ABC transporter substrate-binding protein 0.95 0.40
    2 PS417_04010 glycine/betaine ABC transporter ATP-binding protein 0.94 0.38
    3 PS417_04025 glycine/betaine ABC transporter permease 0.91 0.37
    4 PS417_22320 amino acid APC transporter 0.36 0.27
    5 PS417_01900 poly(3-hydroxyalkanoate) depolymerase 0.45 0.25
    6 PS417_19595 3-methylcrotonyl-CoA carboxylase no 0.25
    7 PS417_20585 chemotaxis protein no 0.23
    8 PS417_21550 hypothetical protein no 0.22
    9 PS417_22325 amino acid APC transporter 0.56 0.21
    10 PS417_19635 lipid kinase no 0.21
    11 PS417_25280 methyltransferase no 0.21
    12 PS417_19610 molybdenum cofactor sulfurase no 0.20
    13 PS417_26345 choline dehydrogenase 0.40 0.20
    14 PS417_15650 glutamine amidotransferase no 0.20
    15 PS417_03930 thymidine phosphorylase no 0.20
    16 PS417_27385 amino acid ABC transporter substrate-binding protein 0.34 0.20
    17 PS417_14785 glycine/betaine ABC transporter 0.76 0.20
    18 PS417_22805 hypothetical protein no 0.19
    19 PS417_08940 thioesterase no 0.19
    20 PS417_06445 iron-siderophore ABC transporter permease no 0.18

    Or look for negative cofitness