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  • Top cofit genes for GFF789 from Variovorax sp. SCN45

    protease Do
    SEED: HtrA protease/chaperone protein
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4228 2-hydroxychromene-2-carboxylate isomerase no 0.65
    2 GFF4288 Acyl-CoA dehydrogenase no 0.59
    3 GFF1323 Methionine aminopeptidase (EC 3.4.11.18) no 0.57
    4 GFF4571 Acyl-CoA dehydrogenase family protein no 0.57
    5 GFF2077 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.56
    6 GFF398 Putative oxidoreductase no 0.56
    7 GFF4924 Transmembrane component BioN of energizing module of biotin ECF transporter no 0.55
    8 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system no 0.55
    9 GFF2099 Acyl-CoA dehydrogenase no 0.55
    10 GFF3422 Lipoprotein-related protein no 0.54
    11 GFF2258 4-hydroxybenzoate transporter no 0.53
    12 GFF3361 Hydrolase no 0.53
    13 GFF2265 Catechol 1,2-dioxygenase (EC 1.13.11.1) no 0.53
    14 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) no 0.52
    15 GFF3166 Transcriptional regulator, IclR family no 0.52
    16 GFF3565 Acyl-CoA dehydrogenase no 0.52
    17 GFF3670 Two-component system sensor histidine kinase no 0.52
    18 GFF1518 3-dehydroquinate dehydratase II (EC 4.2.1.10) no 0.51
    19 GFF1737 Carbon starvation protein A no 0.51
    20 GFF1008 Glyoxalase family protein no 0.51

    Or look for negative cofitness