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  • Top cofit genes for GFF787 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4309 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.62
    2 GFF943 Intracellular PHB depolymerase no 0.60
    3 GFF6591 Transcriptional regulator, GntR family no 0.60
    4 GFF5101 Dihydroxy-acid dehydratase (EC 4.2.1.9) no 0.58
    5 GFF796 Transcriptional activator MetR no 0.55
    6 GFF808 Polyhydroxyalkanoic acid synthase no 0.55
    7 GFF5766 Chemotaxis protein CheD no 0.55
    8 GFF5907 Biotin synthase-related enzyme no 0.54
    9 GFF713 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.79) no 0.54
    10 GFF2016 hypothetical protein no 0.54
    11 GFF683 Transcriptional regulator, LysR family no 0.53
    12 GFF1470 Putative transposase InsK for insertion sequence element IS150 no 0.53
    13 GFF1932 no description no 0.53
    14 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) no 0.53
    15 GFF2961 CzcABC family efflux RND transporter, transmembrane protein no 0.53
    16 GFF3163 Transcriptional regulator, IclR family no 0.53
    17 GFF6831 hypothetical protein no 0.51
    18 GFF405 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) no 0.50
    19 GFF7083 Mobile element protein no 0.50
    20 GFF4403 Mobile element protein no 0.50

    Or look for negative cofitness