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  • Top cofit genes for GFF787 from Sphingobium sp. HT1-2

    Lysine decarboxylase family
    SEED: putative lysine decarboxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1842 hypothetical protein no 0.88
    2 GFF1488 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.88
    3 GFF4405 hypothetical protein no 0.87
    4 GFF2521 hypothetical protein no 0.83
    5 GFF1589 hypothetical protein no 0.83
    6 GFF2726 alpha-L-arabinofuranosidase (EC 3.2.1.55) no 0.82
    7 GFF52 Choloylglycine hydrolase (EC 3.5.1.24) no 0.80
    8 GFF513 hypothetical protein no 0.80
    9 GFF2291 Acylamino-acid-releasing enzyme (EC 3.4.19.1) no 0.80
    10 GFF872 LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) no 0.80
    11 GFF1494 hypothetical protein no 0.80
    12 GFF3565 hypothetical protein no 0.80
    13 GFF2985 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) 0.36 0.79
    14 GFF4665 hypothetical protein no 0.79
    15 GFF3870 Glyoxalase family protein no 0.78
    16 GFF1632 AmpG permease no 0.78
    17 GFF3104 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) no 0.77
    18 GFF4579 CzcABC family efflux RND transporter, outer membrane protein no 0.77
    19 GFF2570 Uncharacterized amino acid permease, GabP family no 0.77
    20 GFF4582 hypothetical protein no 0.77

    Or look for negative cofitness