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  • Top cofit genes for GFF785 from Variovorax sp. SCN45

    Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF642 Membrane protease family protein BA0301 no 0.59
    2 GFF1042 Glutathione S-transferase, unnamed subgroup 2 (EC 2.5.1.18) no 0.59
    3 GFF5377 Transcriptional regulator, AcrR family no 0.55
    4 GFF6425 no description no 0.55
    5 GFF4185 RNA polymerase ECF-type sigma factor no 0.53
    6 GFF6939 ABC-type antimicrobial peptide transport system, permease component no 0.52
    7 GFF5927 3-oxoacyl-[ACP] synthase no 0.51
    8 GFF112 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.50
    9 GFF5600 no description no 0.50
    10 GFF5743 Flagellar motor switch protein FliM no 0.49
    11 GFF4092 Copper tolerance protein no 0.49
    12 GFF5269 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) no 0.49
    13 GFF2964 L-carnitine dehydratase/bile acid-inducible protein F no 0.48
    14 GFF1919 Rhodanese-related sulfurtransferase, 4 domains no 0.48
    15 GFF5986 hypothetical protein no 0.48
    16 GFF3074 Putative polysaccharide deacetylase no 0.48
    17 GFF4296 hypothetical protein no 0.48
    18 GFF6217 hypothetical protein no 0.48
    19 GFF3502 hypothetical protein no 0.48
    20 GFF7161 Transcriptional regulator, LysR family no 0.47

    Or look for negative cofitness