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  • Top cofit genes for GFF784 from Variovorax sp. SCN45

    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.66
    2 GFF7250 Putative transposase InsK for insertion sequence element IS150 no 0.62
    3 GFF2113 NADH dehydrogenase (EC 1.6.99.3) no 0.62
    4 GFF2718 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.61
    5 GFF2602 no description no 0.61
    6 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX no 0.59
    7 GFF1188 Thiazole synthase (EC 2.8.1.10) no 0.59
    8 GFF2859 Excinuclease ABC subunit C no 0.59
    9 GFF769 Conserved TM helix no 0.59
    10 GFF4288 Acyl-CoA dehydrogenase no 0.58
    11 GFF417 Aspartate aminotransferase (AspB-4) (EC 2.6.1.1) no 0.58
    12 GFF6107 Zinc transporter, ZIP family no 0.58
    13 GFF4304 Cyclohexanecarboxylate--CoA ligase no 0.58
    14 GFF2111 Permease of the drug/metabolite transporter (DMT) superfamily no 0.58
    15 GFF1137 FIG00348850: hypothetical protein no 0.58
    16 GFF816 L-carnitine dehydratase/bile acid-inducible protein F 0.19 0.57
    17 GFF4345 hypothetical protein no 0.57
    18 GFF5727 Methyl-accepting chemotaxis sensor/transducer protein no 0.57
    19 GFF1615 Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1) no 0.56
    20 GFF4449 TldD protein, part of TldE/TldD proteolytic complex no 0.56

    Or look for negative cofitness