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  • Top cofit genes for GFF78 from Variovorax sp. SCN45

    Cytochrome c family protein
    SEED: Cytochrome c, mono- and diheme variants

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6374 predicted 2-keto-3-deoxyxylonate dehydratase no 0.62
    2 GFF849 putative carboxylesterase no 0.59
    3 GFF2478 no description no 0.58
    4 GFF3483 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.55
    5 GFF6653 Aminotransferase, class III no 0.54
    6 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.54
    7 GFF6062 Sodium-dependent phosphate transporter no 0.54
    8 GFF7184 hypothetical protein no 0.52
    9 GFF4719 hypothetical protein no 0.52
    10 GFF6571 Conjugative transfer protein TrbI no 0.52
    11 GFF7222 Coenzyme F390 synthetase no 0.52
    12 GFF6891 Phenazine biosynthesis protein PhzF like no 0.50
    13 GFF606 BUG/TctC family periplasmic protein no 0.50
    14 GFF5220 putative secreted oxidoreductase no 0.50
    15 GFF1435 BUG/TctC family periplasmic protein no 0.50
    16 GFF2280 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.50
    17 GFF2366 Tricarboxylate transport protein TctC no 0.49
    18 GFF1181 hypothetical protein no 0.49
    19 GFF2655 Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit no 0.49
    20 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) no 0.49

    Or look for negative cofitness