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  • Top cofit genes for PS417_03900 from Pseudomonas simiae WCS417

    type II secretion system protein F
    SEED: Type IV fimbrial assembly protein PilC
    KEGG: type IV pilus assembly protein PilC

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12760 histidine kinase no 0.29
    2 PS417_14485 malto-oligosyltrehalose trehalohydrolase no 0.28
    3 PS417_27055 hypothetical protein 0.24 0.26
    4 PS417_24935 hypothetical protein no 0.25
    5 PS417_05600 dehydrogenase no 0.25
    6 PS417_20835 LysR family transcriptional regulator no 0.24
    7 PS417_18990 membrane protein 0.40 0.23
    8 PS417_22670 AraC family transcriptional regulator no 0.23
    9 PS417_07445 peptidase S9 no 0.23
    10 PS417_03105 secretin 0.58 0.23
    11 PS417_03050 hypothetical protein no 0.22
    12 PS417_23065 hypothetical protein no 0.22
    13 PS417_17340 GNAT family acetyltransferase no 0.22
    14 PS417_26330 beta-aspartyl peptidase no 0.22
    15 PS417_21370 allantoin permease no 0.22
    16 PS417_04885 type IV secretion protein Rhs no 0.21
    17 PS417_28170 transcriptional regulator no 0.21
    18 PS417_19140 TenA family transcriptional regulator 0.67 0.21
    19 PS417_20175 LysR family transcriptional regulator no 0.21
    20 PS417_17195 pyruvate dehydrogenase no 0.21

    Or look for negative cofitness