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  • Top cofit genes for PS417_03800 from Pseudomonas simiae WCS417

    pilus assembly protein
    SEED: Type IV pilus biogenesis protein PilE
    KEGG: type IV pilus assembly protein PilE

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_23740 LysR family transcriptional regulator no 0.29
    2 PS417_12610 RNA polymerase sigma factor no 0.23
    3 PS417_12595 transcriptional regulator no 0.23
    4 PS417_11935 ABC transporter substrate-binding protein no 0.22
    5 PS417_04770 LysR family transcriptional regulator no 0.22
    6 PS417_02495 GTPase HflX 0.39 0.21
    7 PS417_19145 membrane protein no 0.21
    8 PS417_21050 serine acetyltransferase no 0.21
    9 PS417_21045 cysteine synthase no 0.20
    10 PS417_13425 cupin no 0.20
    11 PS417_21945 RNA polymerase subunit sigma-24 0.49 0.20
    12 PS417_11415 hypothetical protein no 0.20
    13 PS417_06080 hypothetical protein no 0.20
    14 PS417_01015 polar amino acid ABC transporter permease no 0.20
    15 PS417_23785 sulfite oxidase no 0.19
    16 PS417_05140 dipicolinate synthase 0.48 0.19
    17 PS417_05985 chemotaxis protein CheY no 0.19
    18 PS417_03070 LuxR family transcriptional regulator no 0.19
    19 PS417_22205 potassium transporter TrkH no 0.19
    20 PS417_08340 type IV secretion protein Rhs no 0.18

    Or look for negative cofitness