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  • Top cofit genes for PS417_03790 from Pseudomonas simiae WCS417

    pilus assembly protein PilW
    SEED: Type IV fimbrial biogenesis protein PilW
    KEGG: type IV pilus assembly protein PilW

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24860 hypothetical protein no 0.25
    2 PS417_22555 chemotaxis protein no 0.23
    3 PS417_00900 4-aminobutyrate aminotransferase 0.79 0.23
    4 PS417_12665 hypothetical protein no 0.23
    5 PS417_25705 lipoate--protein ligase 0.66 0.21
    6 PS417_18480 permease 0.70 0.20
    7 PS417_00575 LysR family transcriptional regulator 0.80 0.20
    8 PS417_10535 hypothetical protein no 0.19
    9 PS417_22535 ornithine acetyltransferase no 0.19
    10 PS417_14695 hypothetical protein no 0.19
    11 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) no 0.19
    12 PS417_19620 hypothetical protein no 0.19
    13 PS417_18085 general secretion pathway protein GspE no 0.18
    14 PS417_14755 UV damage repair endonuclease UvdE no 0.18
    15 PS417_07315 LysR family transcriptional regulator 0.64 0.18
    16 PS417_10965 chemotaxis protein no 0.18
    17 PS417_13985 dehydrogenase no 0.18
    18 PS417_19790 ATP synthase no 0.18
    19 PS417_09715 hypothetical protein no 0.17
    20 PS417_21275 GntR family transcriptional regulator 0.21 0.17

    Or look for negative cofitness