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  • Top cofit genes for GFF746 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1503 Dihydrofolate reductase homolog no 0.57
    2 GFF3723 Cytochrome c5 no 0.56
    3 GFF3904 Probable signal peptide protein no 0.55
    4 GFF943 Intracellular PHB depolymerase no 0.54
    5 GFF254 N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2 no 0.53
    6 GFF808 Polyhydroxyalkanoic acid synthase no 0.53
    7 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.52
    8 GFF966 Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) no 0.52
    9 GFF6723 Cysteine desulfurase (EC 2.8.1.7) no 0.51
    10 GFF879 BUG/TctC family periplasmic protein no 0.51
    11 GFF2847 histone-like nucleoid-structuring protein H-NS no 0.51
    12 GFF601 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.51
    13 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) no 0.50
    14 GFF689 protein of unknown function DUF521 no 0.50
    15 GFF5763 Signal transduction histidine kinase CheA no 0.49
    16 GFF6076 Spermidine synthase-like protein no 0.49
    17 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) no 0.49
    18 GFF3315 Cu(I)-responsive transcriptional regulator 0.30 0.49
    19 GFF724 Fe2+-dicitrate sensor, membrane component no 0.49
    20 GFF6871 FIG00905613: hypothetical protein no 0.48

    Or look for negative cofitness