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  • Top cofit genes for GFF741 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6087 Transcriptional regulator, AcrR family no 0.72
    2 GFF2499 ATP/GTP-binding protein no 0.71
    3 GFF3653 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 0.26 0.71
    4 GFF2137 Ribose operon repressor no 0.70
    5 GFF2650 hypothetical protein 0.22 0.69
    6 GFF1164 2-isopropylmalate synthase (EC 2.3.3.13) no 0.69
    7 GFF1155 Putative transmembrane protein no 0.69
    8 GFF2539 FAD/FMN-containing dehydrogenases no 0.68
    9 GFF2987 CBS domain protein no 0.68
    10 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.31 0.67
    11 GFF7291 Magnesium and cobalt transport protein CorA no 0.67
    12 GFF442 hypothetical transporter PduT for various metalloporphyrins no 0.66
    13 GFF4449 TldD protein, part of TldE/TldD proteolytic complex no 0.66
    14 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) 0.28 0.66
    15 GFF2008 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) no 0.65
    16 GFF5156 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) no 0.65
    17 GFF342 ATP-dependent Clp protease adaptor protein ClpS no 0.65
    18 GFF4398 Transcriptional regulator, AcrR family no 0.65
    19 GFF1792 Transcriptional regulator, IclR family no 0.65
    20 GFF5157 Glucoamylase (EC 3.2.1.3) no 0.65

    Or look for negative cofitness