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  • Top cofit genes for GFF7364 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2422 Polysaccharide deacetylase no 0.68
    2 GFF7020 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.60
    3 GFF3864 Sigma factor RpoE negative regulatory protein RseA no 0.59
    4 GFF5396 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.59
    5 GFF4775 Broad-specificity amino acid ABC transporter, substrate-binding protein no 0.58
    6 GFF6891 Phenazine biosynthesis protein PhzF like no 0.58
    7 GFF2136 Ribokinase (EC 2.7.1.15) no 0.57
    8 GFF619 Aspartate carbamoyltransferase (EC 2.1.3.2) no 0.57
    9 GFF299 Ribosomal silencing factor RsfA no 0.57
    10 GFF7086 Transcriptional regulator, IclR family no 0.56
    11 GFF6485 hypothetical protein no 0.55
    12 GFF7363 hypothetical protein no 0.55
    13 GFF4996 no description no 0.54
    14 GFF4414 Conjugative transfer protein TrbB no 0.53
    15 GFF2608 Transcriptional regulator FrcR for fructose utilization, ROK family no 0.53
    16 GFF4949 ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.53
    17 GFF7122 no description no 0.53
    18 GFF7416 DNA/RNA non-specific endonuclease no 0.53
    19 GFF5078 Uncharacterized protein CbuG_0353 no 0.52
    20 GFF782 Alpha-ketoglutarate-dependent dioxygenase AlkB (EC 1.14.11.33) no 0.52

    Or look for negative cofitness