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  • Top cofit genes for GFF7360 from Variovorax sp. SCN45

    Urea ABC transporter, substrate-binding protein UrtA
    SEED: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1630 Esterase/lipase no 0.57
    2 GFF1304 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) no 0.55
    3 GFF4730 hypothetical protein no 0.52
    4 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.52
    5 GFF2416 Transcriptional regulator YbhD, LysR family no 0.51
    6 GFF1207 no description no 0.50
    7 GFF4647 no description no 0.50
    8 GFF39 Transcriptional regulator, LysR family no 0.49
    9 GFF1124 no description no 0.49
    10 GFF504 SAM-dependent methyltransferases no 0.49
    11 GFF5001 Oxidoreductase, molybdopterin-binding no 0.49
    12 GFF66 hypothetical protein no 0.48
    13 GFF5167 BLUF domain protein no 0.48
    14 GFF1543 Putative SigmaB asociated two-component system sensor protein no 0.48
    15 GFF6462 Integral membrane protein no 0.48
    16 GFF2093 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.48
    17 GFF3458 Rubisco activation protein CbbQ no 0.48
    18 GFF681 Hypothetical protein in cluster with At3g50560-like gene family no 0.48
    19 GFF6244 Predicted deacylase no 0.47
    20 GFF313 FIG027190: Putative transmembrane protein no 0.47

    Or look for negative cofitness