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  • Top cofit genes for GFF7359 from Variovorax sp. SCN45

    High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
    SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF562 Type IV pilus biogenesis protein PilE no 0.57
    2 GFF4252 hypothetical protein no 0.56
    3 GFF1620 Large exoproteins involved in heme utilization or adhesion no 0.54
    4 GFF811 Glutathione S-transferase (EC 2.5.1.18) no 0.53
    5 GFF5902 probable membrane protein STY1534 no 0.52
    6 GFF1295 FIG00455815: hypothetical protein no 0.52
    7 GFF4353 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.51
    8 GFF791 RNA polymerase sigma factor RpoE no 0.49
    9 GFF4159 no description no 0.49
    10 GFF635 Urea ABC transporter, permease protein UrtB no 0.48
    11 GFF1243 transglutaminase, N-terminal domain protein no 0.48
    12 GFF462 BUG/TctC family periplasmic protein no 0.48
    13 GFF1039 Far-related protein no 0.48
    14 GFF6850 Hemolysin activation/secretion protein associated with VreARI signalling system no 0.48
    15 GFF3814 OpgC protein no 0.47
    16 GFF5505 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7) no 0.47
    17 GFF6411 Histidine ABC transporter, ATP-binding protein no 0.46
    18 GFF7158 Pirin no 0.46
    19 GFF3511 no description no 0.46
    20 GFF7056 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.46

    Or look for negative cofitness