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  • Top cofit genes for GFF7356 from Variovorax sp. SCN45

    Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1)
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.67
    2 GFF92 KEGG: general secretion pathway protein I no 0.65
    3 GFF3502 hypothetical protein no 0.65
    4 GFF7242 hypothetical protein no 0.63
    5 GFF6245 no description no 0.62
    6 GFF4916 FIG00959407: hypothetical protein no 0.61
    7 GFF3544 no description no 0.57
    8 GFF4144 Prolyl endopeptidase (EC 3.4.21.26) no 0.57
    9 GFF3924 Ferredoxin no 0.56
    10 GFF6556 hypothetical protein no 0.56
    11 GFF1283 FMN-dependent NADH-azoreductase (EC 1.7.1.6) no 0.56
    12 GFF5216 Metal dependent phosphohydrolase no 0.56
    13 GFF1831 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3 no 0.56
    14 GFF3274 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no 0.56
    15 GFF7357 Phenylacetate ABC transporter, ATP-binding protein 1 no 0.55
    16 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.54
    17 GFF6226 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) no 0.54
    18 GFF7161 Transcriptional regulator, LysR family no 0.53
    19 GFF856 no description no 0.53
    20 GFF5602 FIG00348944: hypothetical protein no 0.53

    Or look for negative cofitness