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Cofit
Protein
Homologs
Top cofit genes for GFF7342 from
Variovorax sp. SCN45
Oxidoreductase
SEED: Nucleoside-diphosphate-sugar epimerases
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3541
hypothetical protein
no
0.60
2
GFF4899
Transcriptional regulator, Crp/Fnr family
no
0.60
3
GFF6014
Transcriptional regulator, LysR family
no
0.60
4
GFF240
Cytosol aminopeptidase PepA (EC 3.4.11.1)
no
0.59
5
GFF5528
Conjugative transfer protein TrbL
no
0.57
6
GFF232
Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18)
no
0.54
7
GFF5035
Opine oxidase subunit A
no
0.54
8
GFF4000
ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12)
no
0.53
9
GFF804
Fumarylacetoacetate hydrolase family protein
no
0.52
10
GFF806
Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18)
no
0.52
11
GFF2106
hypothetical protein
no
0.52
12
GFF3367
Septum site-determining protein MinC
no
0.52
13
GFF5262
Ferric iron ABC transporter, iron-binding protein
no
0.51
14
GFF4246
FIG00464377: hypothetical protein
no
0.51
15
GFF928
tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91)
no
0.50
16
GFF2286
BUG/TctC family periplasmic protein
no
0.50
17
GFF1230
Malic enzyme
no
0.50
18
GFF5521
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128)
no
0.50
19
GFF3258
hypothetical protein
no
0.49
20
GFF4968
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
no
0.49
Or look for
negative cofitness