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  • Top cofit genes for GFF7342 from Variovorax sp. SCN45

    Oxidoreductase
    SEED: Nucleoside-diphosphate-sugar epimerases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3541 hypothetical protein no 0.60
    2 GFF4899 Transcriptional regulator, Crp/Fnr family no 0.60
    3 GFF6014 Transcriptional regulator, LysR family no 0.60
    4 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.59
    5 GFF5528 Conjugative transfer protein TrbL no 0.57
    6 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.54
    7 GFF5035 Opine oxidase subunit A no 0.54
    8 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.53
    9 GFF804 Fumarylacetoacetate hydrolase family protein no 0.52
    10 GFF806 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) no 0.52
    11 GFF2106 hypothetical protein no 0.52
    12 GFF3367 Septum site-determining protein MinC no 0.52
    13 GFF5262 Ferric iron ABC transporter, iron-binding protein no 0.51
    14 GFF4246 FIG00464377: hypothetical protein no 0.51
    15 GFF928 tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) no 0.50
    16 GFF2286 BUG/TctC family periplasmic protein no 0.50
    17 GFF1230 Malic enzyme no 0.50
    18 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) no 0.50
    19 GFF3258 hypothetical protein no 0.49
    20 GFF4968 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit no 0.49

    Or look for negative cofitness