• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF7340 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
    SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3125 no description no 0.63
    2 GFF7299 MotA/TolQ/ExbB proton channel family protein no 0.61
    3 GFF5995 LysR family transcriptional regulator STM3121 no 0.58
    4 GFF3659 Two-component transcriptional response regulator, OmpR family no 0.55
    5 GFF3300 hypothetical protein no 0.55
    6 GFF1656 hypothetical protein no 0.55
    7 GFF803 MutT/Nudix family protein no 0.55
    8 GFF1186 Ferrichrome-iron receptor no 0.54
    9 GFF693 BUG/TctC family periplasmic protein no 0.54
    10 GFF5732 Methyl-accepting chemotaxis sensor/transducer protein no 0.54
    11 GFF4252 hypothetical protein no 0.54
    12 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.53
    13 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.53
    14 GFF6805 FIG00821908: hypothetical protein no 0.53
    15 GFF5709 no description no 0.52
    16 GFF1849 FIG00347667: hypothetical protein no 0.52
    17 GFF1345 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) 0.27 0.52
    18 GFF2225 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.52
    19 GFF3201 no description no 0.51
    20 GFF3765 no description no 0.51

    Or look for negative cofitness