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  • Top cofit genes for GFF7336 from Variovorax sp. SCN45

    Alkanesulfonate utilization operon LysR-family regulator Cbl
    SEED: Alkanesulfonate utilization operon LysR-family regulator CbI
    KEGG: LysR family transcriptional regulator, cys regulon transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3224 no description no 0.61
    2 GFF1474 Transcriptional regulator, LysR family no 0.57
    3 GFF4134 Small molecule metabolism no 0.51
    4 GFF6666 Transcriptional regulator protein 0.59 0.51
    5 GFF2648 Transcriptional regulator, AraC family no 0.50
    6 GFF1195 iron-sulphur protein no 0.48
    7 GFF3842 Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) no 0.48
    8 GFF4971 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.48
    9 GFF6989 Flagellar basal-body rod modification protein FlgD no 0.48
    10 GFF6974 no description no 0.48
    11 GFF1875 no description no 0.47
    12 GFF3075 Surface antigen no 0.47
    13 GFF7291 Magnesium and cobalt transport protein CorA no 0.47
    14 GFF3340 FIG00932469: hypothetical protein no 0.47
    15 GFF7166 Glyoxalase family protein no 0.47
    16 GFF1247 Sulfate and thiosulfate binding protein CysP no 0.47
    17 GFF157 Methyltransferase type 12 no 0.47
    18 GFF6090 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) no 0.47
    19 GFF6159 carbon monoxide dehydrogenase G protein no 0.47
    20 GFF5857 Fe2+-dicitrate sensor, membrane component no 0.46

    Or look for negative cofitness