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  • Top cofit genes for GFF7332 from Variovorax sp. SCN45

    Intracellular protease
    SEED: ThiJ/PfpI family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF485 hypothetical protein no 0.48
    2 GFF1527 Ferrichrome-iron receptor no 0.47
    3 GFF5130 hypothetical protein no 0.46
    4 GFF462 BUG/TctC family periplasmic protein no 0.44
    5 GFF2031 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.44
    6 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.44
    7 GFF1667 N-methylhydantoinase B (EC 3.5.2.14) no 0.44
    8 GFF4163 Phosphopentomutase (EC 5.4.2.7) no 0.43
    9 GFF1300 hypothetical protein no 0.43
    10 GFF2882 BUG/TctC family periplasmic protein no 0.43
    11 GFF4389 Type IV secretory pathway, VirD2 components (relaxase) no 0.42
    12 GFF861 S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase no 0.42
    13 GFF7369 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.42
    14 GFF4933 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) no 0.42
    15 GFF5241 General secretion pathway protein J no 0.41
    16 GFF4418 Conjugative transfer protein TrbJ no 0.40
    17 GFF5469 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.40
    18 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.26 0.40
    19 GFF5793 Low-affinity inorganic phosphate transporter no 0.40
    20 GFF6627 Mobile element protein no 0.40

    Or look for negative cofitness