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Cofit
Protein
Homologs
Top cofit genes for GFF7326 from
Variovorax sp. SCN45
Integrase
SEED: Integrase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4747
Quinone oxidoreductase (EC 1.6.5.5)
no
0.64
2
GFF101
Phosphate-binding DING protein (related to PstS)
no
0.62
3
GFF1668
BUG/TctC family periplasmic protein
no
0.62
4
GFF12
Two-component system sensor histidine kinase
no
0.60
5
GFF5676
Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
no
0.59
6
GFF4635
Transketolase, N-terminal section (EC 2.2.1.1)
no
0.58
7
GFF2160
Aspartate carbamoyltransferase (EC 2.1.3.2)
0.21
0.58
8
GFF3986
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.57
9
GFF4607
Putative DNA methylase
no
0.57
10
GFF4494
hypothetical protein
no
0.57
11
GFF5681
Predicted gluconate TRAP family transporter, DctM subunit
no
0.57
12
GFF1559
Mg(2+)-transport-ATPase-associated protein MgtC
no
0.56
13
GFF1990
Transcriptional regulator, MerR family
no
0.56
14
GFF4825
SWIB/MDM2 domain-containing proteins
no
0.56
15
GFF3704
FIG00536957: hypothetical protein
no
0.56
16
GFF2365
Altronate dehydratase (EC 4.2.1.7)
no
0.55
17
GFF2658
3-methylmercaptopropionyl-CoA dehydrogenase (DmdC)
no
0.55
18
GFF1783
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
no
0.55
19
GFF2844
Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)
no
0.54
20
GFF4907
NAD(P) transhydrogenase C-domain of subunit alpha (EC 1.6.1.2)
0.32
0.54
Or look for
negative cofitness