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  • Top cofit genes for GFF7326 from Variovorax sp. SCN45

    Integrase
    SEED: Integrase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4747 Quinone oxidoreductase (EC 1.6.5.5) no 0.64
    2 GFF101 Phosphate-binding DING protein (related to PstS) no 0.62
    3 GFF1668 BUG/TctC family periplasmic protein no 0.62
    4 GFF12 Two-component system sensor histidine kinase no 0.60
    5 GFF5676 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) no 0.59
    6 GFF4635 Transketolase, N-terminal section (EC 2.2.1.1) no 0.58
    7 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.21 0.58
    8 GFF3986 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.57
    9 GFF4607 Putative DNA methylase no 0.57
    10 GFF4494 hypothetical protein no 0.57
    11 GFF5681 Predicted gluconate TRAP family transporter, DctM subunit no 0.57
    12 GFF1559 Mg(2+)-transport-ATPase-associated protein MgtC no 0.56
    13 GFF1990 Transcriptional regulator, MerR family no 0.56
    14 GFF4825 SWIB/MDM2 domain-containing proteins no 0.56
    15 GFF3704 FIG00536957: hypothetical protein no 0.56
    16 GFF2365 Altronate dehydratase (EC 4.2.1.7) no 0.55
    17 GFF2658 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.55
    18 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO no 0.55
    19 GFF2844 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) no 0.54
    20 GFF4907 NAD(P) transhydrogenase C-domain of subunit alpha (EC 1.6.1.2) 0.32 0.54

    Or look for negative cofitness