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  • Top cofit genes for GFF731 from Variovorax sp. SCN45

    Transcriptional regulator, ArsR family
    SEED: Transcriptional regulator, ArsR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2650 hypothetical protein no 0.66
    2 GFF3419 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.59
    3 GFF4650 Transcriptional regulator, PadR family no 0.59
    4 GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) no 0.58
    5 GFF4132 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.58
    6 GFF3133 hypothetical protein no 0.58
    7 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.57
    8 GFF2141 GTP-binding and nucleic acid-binding protein YchF no 0.57
    9 GFF2065 Peptidase, M23/M37 family no 0.57
    10 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.55
    11 GFF1164 2-isopropylmalate synthase (EC 2.3.3.13) no 0.55
    12 GFF412 Transcription-repair coupling factor no 0.55
    13 GFF5071 AmpG permease no 0.55
    14 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.54
    15 GFF4803 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) no 0.54
    16 GFF17 hypothetical protein no 0.54
    17 GFF571 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) no 0.54
    18 GFF1155 Putative transmembrane protein no 0.54
    19 GFF4576 BUG/TctC family periplasmic protein no 0.53
    20 GFF3267 RNA-binding protein no 0.53

    Or look for negative cofitness