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  • Top cofit genes for GFF7308 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: Permeases of the major facilitator superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1882 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit (EC 1.2.7.-) no 0.59
    2 GFF2313 Two-component system sensor histidine kinase no 0.54
    3 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) 0.41 0.53
    4 GFF1849 FIG00347667: hypothetical protein no 0.52
    5 GFF3693 Oxidoreductase 0.21 0.52
    6 GFF3754 Fumarylacetoacetate hydrolase family protein no 0.52
    7 GFF4321 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.50
    8 GFF5217 Ferric iron ABC transporter, iron-binding protein no 0.50
    9 GFF1704 FIG00901292: hypothetical protein 0.66 0.50
    10 GFF5135 DNA repair exonuclease family protein YhaO no 0.50
    11 GFF40 no description no 0.49
    12 GFF6642 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.49
    13 GFF2489 hypothetical protein no 0.49
    14 GFF379 Ribonuclease HII (EC 3.1.26.4) no 0.48
    15 GFF3964 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) no 0.48
    16 GFF7 no description no 0.48
    17 GFF419 hypothetical protein no 0.48
    18 GFF3798 FIG00932573: hypothetical protein 0.53 0.47
    19 GFF7157 Peptidase M20D, amidohydrolase no 0.47
    20 GFF5674 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion no 0.47

    Or look for negative cofitness