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  • Top cofit genes for GFF7304 from Variovorax sp. SCN45

    Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196)
    SEED: Glycogen debranching enzyme (EC 3.2.1.-)
    KEGG: glycogen operon protein GlgX

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4934 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.64
    2 GFF7067 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.63
    3 GFF156 Glycosyl transferase, group 2 family no 0.60
    4 GFF1986 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.60
    5 GFF6390 GtrA-like protein no 0.58
    6 GFF3912 Ferrous iron transport permease EfeU no 0.57
    7 GFF7076 no description no 0.57
    8 GFF1044 hypothetical protein no 0.57
    9 GFF6052 HNH endonuclease family protein no 0.57
    10 GFF1838 Manganese transport protein MntH no 0.55
    11 GFF5488 Protein of unknown function Smg no 0.54
    12 GFF1373 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) no 0.53
    13 GFF4079 Cytochrome c4 0.33 0.53
    14 GFF1806 Na+/H+-dicarboxylate symporter no 0.53
    15 GFF6402 Imidazolonepropionase (EC 3.5.2.7) no 0.53
    16 GFF4393 Uncharacterized ABC1 family protein XCC_1720 no 0.53
    17 GFF347 Exported protein no 0.52
    18 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 0.31 0.52
    19 GFF6413 Histidine ABC transporter, substrate-binding protein no 0.51
    20 GFF3771 no description no 0.51

    Or look for negative cofitness