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  • Top cofit genes for GFF73 from Variovorax sp. SCN45

    Probable haloacid dehalogenase
    SEED: probable haloacid dehalogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5620 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51
    2 GFF5532 Putative oxidoreductase no 0.50
    3 GFF3085 no description no 0.49
    4 GFF562 Type IV pilus biogenesis protein PilE no 0.48
    5 GFF636 Urea ABC transporter, substrate-binding protein UrtA no 0.48
    6 GFF3130 hypothetical protein no 0.48
    7 GFF697 FIG074102: hypothetical protein no 0.47
    8 GFF1037 putative membrane protein no 0.46
    9 GFF1294 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.46
    10 GFF635 Urea ABC transporter, permease protein UrtB no 0.44
    11 GFF6932 no description no 0.44
    12 GFF6475 hypothetical protein no 0.44
    13 GFF4973 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) no 0.44
    14 GFF6276 Uncharacterized MFS-type transporter no 0.44
    15 GFF142 Oxidoreductase 0.26 0.44
    16 GFF4723 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.44
    17 GFF1219 SAM-dependent methyltransferase no 0.44
    18 GFF42 hypothetical protein no 0.43
    19 GFF1074 no description no 0.43
    20 GFF4708 Transcriptional regulator RSp1267, LysR family no 0.43

    Or look for negative cofitness