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Cofit
Protein
Homologs
Top cofit genes for GFF73 from
Variovorax sp. SCN45
Probable haloacid dehalogenase
SEED: probable haloacid dehalogenase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5620
ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.51
2
GFF5532
Putative oxidoreductase
no
0.50
3
GFF3085
no description
no
0.49
4
GFF562
Type IV pilus biogenesis protein PilE
no
0.48
5
GFF636
Urea ABC transporter, substrate-binding protein UrtA
no
0.48
6
GFF3130
hypothetical protein
no
0.48
7
GFF697
FIG074102: hypothetical protein
no
0.47
8
GFF1037
putative membrane protein
no
0.46
9
GFF1294
Efflux transport system, outer membrane factor (OMF) lipoprotein
no
0.46
10
GFF635
Urea ABC transporter, permease protein UrtB
no
0.44
11
GFF6932
no description
no
0.44
12
GFF6475
hypothetical protein
no
0.44
13
GFF4973
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
no
0.44
14
GFF6276
Uncharacterized MFS-type transporter
no
0.44
15
GFF142
Oxidoreductase
0.26
0.44
16
GFF4723
ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.44
17
GFF1219
SAM-dependent methyltransferase
no
0.44
18
GFF42
hypothetical protein
no
0.43
19
GFF1074
no description
no
0.43
20
GFF4708
Transcriptional regulator RSp1267, LysR family
no
0.43
Or look for
negative cofitness